C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Rho guanine nucleotide exchange factor (GEF) 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183208 Arhgef40-008 ENSMUSG00000004562 10090 + 14:51984886-52005633 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z0 CIL_0004Z0_0003 CGP 14:51984719-52020733

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298694 ARHGEF40-001 protein_coding Homo_sapiens 0 2782
ENST00000553709 ARHGEF40-003 nonsense_mediated_decay Homo_sapiens 0 2662
ENST00000554514 ARHGEF40-006 retained_intron Homo_sapiens 0 1901
ENST00000555038 ARHGEF40-004 protein_coding Homo_sapiens 0 1345
ENST00000555052 ARHGEF40-008 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000555232 ARHGEF40-005 retained_intron Homo_sapiens 0 1618
ENST00000556399 ARHGEF40-002 nonsense_mediated_decay Homo_sapiens 0 4567
ENST00000557498 ARHGEF40-009 retained_intron Homo_sapiens 0 346

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