C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 171
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183729 Ccdc171-005 ENSMUSG00000052407 10090 + 4:83695955-83798676 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLungMuscleOvaryENSMUST00000183729
Transcript ID Adrenal Brain Heart Lung Muscle Ovary
ENSMUST00000183729 0.150±0.00 0.474±0.00 0.186±0.00 0.423±0.00 0.129±0.01 0.530±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051U CIL_00051U_0003 CGP 4:83455680-83864670
CIL_0007VI CIL_0007VI_0002 VISTA 4:83494853-84095171

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380701 CCDC171-001 protein_coding Homo_sapiens 0 760
ENST00000432954 CCDC171-008 protein_coding Homo_sapiens 0 760
ENST00000449575 CCDC171-003 protein_coding Homo_sapiens 0 760
ENST00000470191 CCDC171-005 processed_transcript Homo_sapiens 0 510
ENST00000486641 CCDC171-004 processed_transcript Homo_sapiens 1.99965e-42 178
ENST00000498725 CCDC171-006 processed_transcript Homo_sapiens 0 195

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