C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELKS/RAB6-interacting/CAST family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183872 Erc1-011 ENSMUSG00000030172 10090 - 6:119721278-119796914 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000183872
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000183872 8.597±0.00 11.196±0.00 15.873±3.07 17.546±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006C1 CIL_0006C1_0002 CGP 6:119479668-119848167

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347735 ERC1-008 nonsense_mediated_decay Homo_sapiens 0 1247
ENST00000355446 ERC1-011 protein_coding Homo_sapiens 0 1683
ENST00000360905 ERC1-014 protein_coding Homo_sapiens 0 1683
ENST00000397203 ERC1-201 protein_coding Homo_sapiens 0 1304
ENST00000440394 ERC1-013 nonsense_mediated_decay Homo_sapiens 0 1249
ENST00000536573 ERC1-003 processed_transcript Homo_sapiens 0 1748
ENST00000538971 ERC1-016 retained_intron Homo_sapiens 0 1247
ENST00000539007 ERC1-017 retained_intron Homo_sapiens 0 580
ENST00000542302 ERC1-010 nonsense_mediated_decay Homo_sapiens 0 1624
ENST00000543086 ERC1-001 protein_coding Homo_sapiens 0 1304
ENST00000544277 ERC1-007 processed_transcript Homo_sapiens 1.00053e-42 176
ENST00000545948 ERC1-004 nonsense_mediated_decay Homo_sapiens 0 1053
ENST00000546231 ERC1-015 protein_coding Homo_sapiens 0 1628
ENST00000588412 ERC1-019 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000589028 ERC1-202 protein_coding Homo_sapiens 0 1683
ENST00000592048 ERC1-006 protein_coding Homo_sapiens 0 298
ENST00000611180 ERC1-203 protein_coding Homo_sapiens 0 1053

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