| Transcript ID | Liver |
|---|---|
| ENST00000545948 | 3.119±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ELKS/RAB6-interacting/CAST family member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000545948  |
ERC1-004 |
ENSG00000082805 |
9606 | + |
12:991273-1490377  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007TY | CIL_0007TY_0001 | VISTA | 12:564896-1165613 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | ISS | cytoplasm |
| GO:0005794 | IEA | Golgi apparatus |
| GO:0006355 | NAS | regulation of transcription, DNA-templated |
| GO:0007252 | IDA | I-kappaB phosphorylation |
| GO:0007275 | NAS | multicellular organismal development |
| GO:0008385 | IDA | IkappaB kinase complex |
| GO:0015031 | IEA | protein transport |
| GO:0017137 | ISS | Rab GTPase binding |
| GO:0030165 | ISS | PDZ domain binding |
| GO:0042147 | ISS | retrograde transport, endosome to Golgi |
| GO:0042734 | TAS | presynaptic membrane |
| GO:0043522 | NAS | leucine zipper domain binding |
| GO:0045202 | ISS | synapse |
| GO:0051092 | TAS | positive regulation of NF-kappaB transcription factor activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000185143
|
Erc1-008 | nonsense_mediated_decay | Mus_musculus | 0 | 3312 |
|
ENSMUST00000185139
|
Erc1-003 | nonsense_mediated_decay | Mus_musculus | 0 | 2314 |
|
ENSMUST00000032279
|
Erc1-201 | protein_coding | Mus_musculus | 0 | 1810 |
|
ENSMUST00000183703
|
Erc1-001 | protein_coding | Mus_musculus | 0 | 1810 |
|
ENSMUST00000183911
|
Erc1-007 | protein_coding | Mus_musculus | 0 | 1733 |
|
ENSMUST00000184864
|
Erc1-009 | protein_coding | Mus_musculus | 0 | 1733 |
|
ENSMUST00000184320
|
Erc1-010 | nonsense_mediated_decay | Mus_musculus | 0 | 1528 |
|
ENSMUST00000184838
|
Erc1-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1131 |
|
ENSMUST00000183880
|
Erc1-004 | nonsense_mediated_decay | Mus_musculus | 0 | 1131 |
|
ENSMUST00000183872
|
Erc1-011 | processed_transcript | Mus_musculus | 0 | 1053 |
|
ENSMUST00000183741
|
Erc1-006 | retained_intron | Mus_musculus | 0 | 979 |
|
ENSMUST00000079582
|
Erc1-005 | protein_coding | Mus_musculus | 0 | 342 |
