C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 28036
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183972 Gm28036-005 ENSMUSG00000098950 10090 - 2:156079097-156096928 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0002 VISTA 2:155562263-156164147
CIL_0005FU CIL_0005FU_0002 CGP 2:156065175-156111965

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317677 CPNE1-005 protein_coding Homo_sapiens 0 355
ENST00000352393 CPNE1-004 protein_coding Homo_sapiens 0 357
ENST00000359646 RBM12-003 protein_coding Homo_sapiens 3e-34 152
ENST00000374104 RBM12-002 protein_coding Homo_sapiens 3e-34 152
ENST00000374114 RBM12-001 protein_coding Homo_sapiens 4e-34 152
ENST00000397442 CPNE1-032 protein_coding Homo_sapiens 0 357
ENST00000397443 CPNE1-201 protein_coding Homo_sapiens 0 357
ENST00000397445 CPNE1-202 protein_coding Homo_sapiens 0 359
ENST00000401607 CPNE1-028 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000412056 CPNE1-014 protein_coding Homo_sapiens 0 357
ENST00000414664 CPNE1-007 protein_coding Homo_sapiens 0 357
ENST00000414711 CPNE1-011 protein_coding Homo_sapiens 0 357
ENST00000416778 CPNE1-017 protein_coding Homo_sapiens 0 357
ENST00000420363 CPNE1-008 protein_coding Homo_sapiens 0 359
ENST00000430570 CPNE1-013 protein_coding Homo_sapiens 0 357
ENST00000434795 CPNE1-016 protein_coding Homo_sapiens 0 359
ENST00000435747 CPNE1-021 protein_coding Homo_sapiens 0 252
ENST00000437100 CPNE1-010 protein_coding Homo_sapiens 0 357
ENST00000437340 CPNE1-033 protein_coding Homo_sapiens 0 357
ENST00000439669 CPNE1-025 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000439806 CPNE1-009 protein_coding Homo_sapiens 0 359
ENST00000440240 CPNE1-012 protein_coding Homo_sapiens 0 357
ENST00000441563 RP1-309K20.6-003 nonsense_mediated_decay Homo_sapiens 0 195
ENST00000454607 RP1-309K20.6-002 nonsense_mediated_decay Homo_sapiens 0 195
ENST00000458038 CPNE1-020 protein_coding Homo_sapiens 0 359
ENST00000483359 CPNE1-027 retained_intron Homo_sapiens 0 357
ENST00000541176 RP1-309K20.6-001 nonsense_mediated_decay Homo_sapiens 0 357

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