C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000541176  |
RP1-309K20.6-001 |
ENSG00000272897 |
9606 | - |
20:35632340-35674544  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005FU | CIL_0005FU_0001 | CGP | 20:35615892-35664956 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0008152 | IEA | metabolic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000159952
|
Gm28036-008 | nonsense_mediated_decay | Mus_musculus | 0 | 1105 |
|
ENSMUST00000154889
|
Cpne1-012 | protein_coding | Mus_musculus | 0 | 800 |
|
ENSMUST00000133921
|
Cpne1-011 | protein_coding | Mus_musculus | 0 | 686 |
|
ENSMUST00000162612
|
Gm28036-006 | nonsense_mediated_decay | Mus_musculus | 0 | 669 |
|
ENSMUST00000160165
|
Gm28036-007 | nonsense_mediated_decay | Mus_musculus | 0 | 490 |
|
ENSMUST00000153634
|
Cpne1-010 | protein_coding | Mus_musculus | 0 | 440 |
|
ENSMUST00000147627
|
Cpne1-009 | nonsense_mediated_decay | Mus_musculus | 0 | 440 |
|
ENSMUST00000079312
|
Cpne1-008 | protein_coding | Mus_musculus | 0 | 440 |
|
ENSMUST00000142960
|
Cpne1-013 | protein_coding | Mus_musculus | 0 | 438 |
|
ENSMUST00000136296
|
Cpne1-005 | protein_coding | Mus_musculus | 0 | 438 |
|
ENSMUST00000109608
|
Cpne1-001 | protein_coding | Mus_musculus | 0 | 438 |
|
ENSMUST00000109607
|
Cpne1-002 | protein_coding | Mus_musculus | 0 | 438 |
|
ENSMUST00000142975
|
Cpne1-003 | retained_intron | Mus_musculus | 0 | 438 |
|
ENSMUST00000184265
|
Cpne1-015 | protein_coding | Mus_musculus | 0 | 438 |
|
ENSMUST00000132494
|
Gm28036-001 | nonsense_mediated_decay | Mus_musculus | 0 | 438 |
|
ENSMUST00000127956
|
Gm28036-002 | nonsense_mediated_decay | Mus_musculus | 0 | 438 |
|
ENSMUST00000184152
|
Cpne1-016 | protein_coding | Mus_musculus | 0 | 436 |
|
ENSMUST00000183518
|
Gm28036-003 | protein_coding | Mus_musculus | 0 | 407 |
|
ENSMUST00000138068
|
Rbm12-006 | protein_coding | Mus_musculus | 0 | 368 |
|
ENSMUST00000184899
|
Gm28036-004 | nonsense_mediated_decay | Mus_musculus | 0 | 368 |
|
ENSMUST00000131377
|
Rbm12-004 | protein_coding | Mus_musculus | 0 | 364 |
|
ENSMUST00000059647
|
Rbm12-001 | protein_coding | Mus_musculus | 0 | 364 |
|
ENSMUST00000183972
|
Gm28036-005 | nonsense_mediated_decay | Mus_musculus | 0 | 357 |
|
ENSMUST00000128499
|
Rbm12-005 | protein_coding | Mus_musculus | 0 | 307 |
|
ENSMUST00000109604
|
Rbm12-002 | protein_coding | Mus_musculus | 0 | 305 |
