C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUB and Sushi multiple domains 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184063 Csmd2-001 ENSMUSG00000028804 10090 + 4:128058962-128567656 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000184063
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000184063 0.006±0.00 0.002±0.00 4.716±3.46 0.021±0.01 0.022±0.01 0.003±0.00 0.007±0.01 0.006±0.01 0.002±0.00 0.008±0.00 0.045±0.03 0.007±0.00 0.187±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N2 CIL_0001N2_0002 CGP 4:127987857-128567656

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000241312 CSMD2-001 nonsense_mediated_decay Homo_sapiens 0 7906
ENST00000338325 CSMD2-004 protein_coding Homo_sapiens 9.94922e-44 182
ENST00000373377 CSMD2-003 protein_coding Homo_sapiens 0 1941
ENST00000373380 CSMD2-002 protein_coding Homo_sapiens 0 4176
ENST00000373381 CSMD2-201 protein_coding Homo_sapiens 0 10020
ENST00000373388 CSMD2-202 protein_coding Homo_sapiens 0 7906
ENST00000465819 CSMD2-006 processed_transcript Homo_sapiens 0 850
ENST00000471438 CSMD2-007 processed_transcript Homo_sapiens 0 209
ENST00000489419 CSMD2-005 processed_transcript Homo_sapiens 0 241
ENST00000619121 CSMD2-203 protein_coding Homo_sapiens 0 10020

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