C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CUB and Sushi multiple domains 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028804 Csmd2 10090 + 4:127987857-128567656 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000129619 Csmd2-002 127987857-128339657 processed_transcript
  ENSMUST00000139561 Csmd2-005 128547936-128552733 processed_transcript
  ENSMUST00000144298 Csmd2-006 127988044-128419617 retained_intron
  ENSMUST00000148247 Csmd2-003 128477154-128501177 processed_transcript
  ENSMUST00000152206 Csmd2-004 128519109-128528312 processed_transcript
  ENSMUST00000184063 Csmd2-001 128058962-128567656 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000129619ENSMUST00000139561ENSMUST00000144298ENSMUST00000148247ENSMUST00000152206ENSMUST00000184063
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000129619 0.064±0.00 N/A N/A N/A 0.064±0.02 0.014±0.01 N/A 0.003±0.00 N/A N/A 0.054±0.00 0.022±0.01 N/A
ENSMUST00000139561 N/A N/A N/A 0.102±0.02 N/A N/A N/A N/A N/A N/A 0.225±0.00 N/A N/A
ENSMUST00000144298 N/A 0.011±0.00 N/A 0.020±0.00 0.053±0.00 N/A N/A N/A 0.015±0.01 N/A 0.033±0.00 0.010±0.00 N/A
ENSMUST00000148247 0.023±0.00 N/A N/A 0.050±0.00 N/A N/A 0.010±0.00 0.003±0.00 N/A N/A 0.033±0.01 0.018±0.01 0.271±0.00
ENSMUST00000152206 N/A N/A N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A 0.325±0.03 N/A N/A
ENSMUST00000184063 0.006±0.00 0.002±0.00 4.716±3.46 0.021±0.01 0.022±0.01 0.003±0.00 0.007±0.01 0.006±0.01 0.002±0.00 0.008±0.00 0.045±0.03 0.007±0.00 0.187±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N2 CIL_0001N2_0002 CGP 4:127987857-128567656

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001559 csmd2 CUB and Sushi multiple domains 2 protein_coding Danio_rerio
ENSG00000121904 CSMD2 CUB and Sushi multiple domains 2 protein_coding Homo_sapiens

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