C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CUB and Sushi multiple domains 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373380 CSMD2-002 ENSG00000121904 9606 - 1:33591807-33709504 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalENST00000373380
Transcript ID Adipose Adrenal
ENST00000373380 0.016±0.00 0.130±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097K CIL_00097K_0001 VISTA 1:32956893-33558359
CIL_0008F1 CIL_0008F1_0001 VISTA 1:33063188-33665346
CIL_0001N2 CIL_0001N2_0001 CGP 1:33513999-34165842

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184063 Csmd2-001 protein_coding Mus_musculus 0 4176
ENSMUST00000148247 Csmd2-003 processed_transcript Mus_musculus 0 1243
ENSDART00000001805 csmd2-201 protein_coding Danio_rerio 0 859
ENSMUST00000144298 Csmd2-006 retained_intron Mus_musculus 0 784
ENSDART00000132471 csmd2-001 protein_coding Danio_rerio 0 368

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