C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUB and Sushi multiple domains 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373377 CSMD2-003 ENSG00000121904 9606 - 1:33598689-33626584 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverLungMuscleTestisENST00000373377
Transcript ID Breast Colon Liver Lung Muscle Testis
ENST00000373377 0.032±0.00 0.102±0.00 0.277±0.00 0.029±0.00 0.088±0.00 0.195±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097K CIL_00097K_0001 VISTA 1:32956893-33558359
CIL_0008F1 CIL_0008F1_0001 VISTA 1:33063188-33665346
CIL_0001N2 CIL_0001N2_0001 CGP 1:33513999-34165842

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184063 Csmd2-001 protein_coding Mus_musculus 0 1941
ENSMUST00000148247 Csmd2-003 processed_transcript Mus_musculus 0 1243
ENSDART00000001805 csmd2-201 protein_coding Danio_rerio 0 536
ENSDART00000132471 csmd2-001 protein_coding Danio_rerio 0 368
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0000001 64

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