C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 18821
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184135 Gm18821-001 ENSMUSG00000098761 10090 + 9:71908843-71909551 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000184135
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000184135 0.341±0.00 0.461±0.12 0.209±0.00 0.666±0.42 0.559±0.33 0.511±0.00 0.231±0.00 0.261±0.09 0.189±0.13 0.498±0.28 0.402±0.22 0.119±0.00 0.188±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OZ CIL_0004OZ_0002 CGP 9:71626509-72111871
CIL_0007TG CIL_0007TG_0002 VISTA 9:71674986-72275900
CIL_0008VA CIL_0008VA_0002 VISTA 9:71675967-72276730
CIL_0004OY CIL_0004OY_0002 CGP 9:71842688-72363777
CIL_0007OL CIL_0007OL_0002 UCNEbase 9:71844385-71975607

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313117 SRSF7-001 protein_coding Homo_sapiens 0 787
ENST00000409276 SRSF7-012 protein_coding Homo_sapiens 0 750
ENST00000415527 SRSF7-004 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000425778 SRSF7-002 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000425941 SRSF7-010 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000431066 SRSF7-011 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000443213 SRSF7-003 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000446327 SRSF7-201 protein_coding Homo_sapiens 0 710

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