C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25 (aspartate/glutamate carrier), member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263812 SLC25A12-006 ENSG00000115840 9606 - 2:171784775-171894223 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000263812
Transcript ID Adipose Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000263812 0.602±0.00 1.521±0.00 2.662±0.00 20.344±0.00 4.305±0.00 1.041±0.00 11.825±1.87 2.739±1.05 1.579±0.58 1.693±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RB CIL_0007RB_0001 VISTA 2:171663732-172264836
CIL_0008A7 CIL_0008A7_0001 VISTA 2:171663843-172264792
CIL_0007RB CIL_0007RB_0002 VISTA 2:171664837-172267307
CIL_00062P CIL_00062P_0002 CGP 2:171687409-171999859
CIL_0007JJ CIL_0007JJ_0001 UCNEbase 2:171723627-171935515
CIL_0008C9 CIL_0008C9_0001 VISTA 2:171771791-172373521
CIL_0009AY CIL_0009AY_0001 VISTA 2:171783051-172384518
CIL_0004K0 CIL_0004K0_0001 CGP 2:171784370-171999859

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184169 Slc25a12-002 nonsense_mediated_decay Mus_musculus 0 2230
ENSMUST00000151937 Slc25a12-001 protein_coding Mus_musculus 0 1956
ENSMUST00000147553 Slc25a12-005 processed_transcript Mus_musculus 0 963
ENSMUST00000146653 Slc25a12-007 processed_transcript Mus_musculus 2.00386e-43 182
ENSMUST00000126493 Slc25a12-003 processed_transcript Mus_musculus 2.00386e-43 182

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