C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ELKS/RAB6-interacting/CAST family member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000185143  |
Erc1-008 |
ENSMUSG00000030172 |
10090 | - |
6:119575530-119848089  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006C1 | CIL_0006C1_0002 | CGP | 6:119479668-119848167 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0017137 | IDA | Rab GTPase binding |
| GO:0042147 | IDA | retrograde transport, endosome to Golgi |
| GO:0045202 | IDA | synapse |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000041169
|
erc1a-201 | protein_coding | Danio_rerio | 0 | 298 |
|
ENSDART00000012923
|
erc1a-002 | protein_coding | Danio_rerio | 0 | 298 |
|
ENSDART00000149142
|
erc1a-001 | protein_coding | Danio_rerio | 0 | 298 |
|
ENST00000347735
|
ERC1-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 1131 |
|
ENST00000355446
|
ERC1-011 | protein_coding | Homo_sapiens | 0 | 1733 |
|
ENST00000360905
|
ERC1-014 | protein_coding | Homo_sapiens | 0 | 1733 |
|
ENST00000397203
|
ERC1-201 | protein_coding | Homo_sapiens | 0 | 1733 |
|
ENST00000440394
|
ERC1-013 | nonsense_mediated_decay | Homo_sapiens | 0 | 2314 |
|
ENST00000515210
|
ERC1-012 | processed_transcript | Homo_sapiens | 2e-23 | 113 |
|
ENST00000536573
|
ERC1-003 | processed_transcript | Homo_sapiens | 0 | 1053 |
|
ENST00000538971
|
ERC1-016 | retained_intron | Homo_sapiens | 0 | 1131 |
|
ENST00000539802
|
ERC1-020 | protein_coding | Homo_sapiens | 0 | 252 |
|
ENST00000542302
|
ERC1-010 | nonsense_mediated_decay | Homo_sapiens | 0 | 1131 |
|
ENST00000543086
|
ERC1-001 | protein_coding | Homo_sapiens | 0 | 1733 |
|
ENST00000543151
|
ERC1-002 | retained_intron | Homo_sapiens | 0 | 401 |
|
ENST00000543263
|
ERC1-018 | processed_transcript | Homo_sapiens | 0 | 542 |
|
ENST00000544277
|
ERC1-007 | processed_transcript | Homo_sapiens | 0 | 270 |
|
ENST00000545318
|
ERC1-005 | protein_coding | Homo_sapiens | 0 | 390 |
|
ENST00000545948
|
ERC1-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 3312 |
|
ENST00000546231
|
ERC1-015 | protein_coding | Homo_sapiens | 0 | 1810 |
|
ENST00000588412
|
ERC1-019 | nonsense_mediated_decay | Homo_sapiens | 0 | 1528 |
|
ENST00000589028
|
ERC1-202 | protein_coding | Homo_sapiens | 0 | 1733 |
|
ENST00000589132
|
ERC1-023 | protein_coding | Homo_sapiens | 0 | 643 |
|
ENST00000592048
|
ERC1-006 | protein_coding | Homo_sapiens | 0 | 342 |
|
ENST00000611180
|
ERC1-203 | protein_coding | Homo_sapiens | 0 | 3284 |
