C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 29397
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185205 RP24-331H14.2-001 ENSMUSG00000101309 10090 + 9:92976226-92976558 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungPlacentaTestisENSMUST00000185205
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Placenta Testis
ENSMUST00000185205 0.285±0.00 0.050±0.00 0.077±0.03 0.567±0.28 0.568±0.01 0.856±0.63 0.480±0.28 0.083±0.06 0.841±0.07 0.031±0.00 0.484±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005X5 CIL_0005X5_0002 CGP 9:92542223-94538081

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264107 ITGA6-001 protein_coding Homo_sapiens 0 464
ENST00000409080 ITGA6-004 protein_coding Homo_sapiens 0 464
ENST00000409532 ITGA6-003 protein_coding Homo_sapiens 0 464
ENST00000416789 ITGA6-006 protein_coding Homo_sapiens 0 274
ENST00000442250 ITGA6-010 protein_coding Homo_sapiens 0 464
ENST00000458358 ITGA6-011 protein_coding Homo_sapiens 0 464
ENST00000469534 ITGA6-007 retained_intron Homo_sapiens 0 351

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