C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: integrin, alpha 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416789 ITGA6-006 ENSG00000091409 9606 + 2:172487962-172504328 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000416789
Transcript ID Testis
ENST00000416789 15.834±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IK CIL_0003IK_0002 CGP 2:172099439-172506282
CIL_0004K8 CIL_0004K8_0001 CGP 2:172427354-172608669

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112101 Itga6-002 protein_coding Mus_musculus 0 723
ENSMUST00000155249 Itga6-004 protein_coding Mus_musculus 0 527
ENSMUST00000028522 Itga6-001 protein_coding Mus_musculus 0 527
ENSMUST00000126787 Itga6-005 processed_transcript Mus_musculus 0 368
ENSMUST00000185205 RP24-331H14.2-001 processed_pseudogene Mus_musculus 0 274

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