C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CLOCK interacting protein, circadian
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185434 Cipc-002 ENSMUSG00000034157 10090 + 12:86947043-86963807 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastLungPlacentaENSMUST00000185434
Transcript ID Adipose Breast Lung Placenta
ENSMUST00000185434 2.314±0.41 2.659±1.29 2.302±0.00 1.396±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VF CIL_0007VF_0002 VISTA 12:86500572-87103602
CIL_0008WP CIL_0008WP_0002 VISTA 12:86510598-87113301
CIL_000867 CIL_000867_0002 VISTA 12:86515545-87117582
CIL_0007VT CIL_0007VT_0002 VISTA 12:86594665-87199694
CIL_0003P0 CIL_0003P0_0002 CGP 12:86880703-86965362
CIL_00071S CIL_00071S_0002 CGP 12:86947043-86988676

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361786 CIPC-001 protein_coding Homo_sapiens 0 1205
ENST00000554447 CIPC-007 protein_coding Homo_sapiens 0 368
ENST00000554658 CIPC-005 protein_coding Homo_sapiens 0 313
ENST00000555200 CIPC-008 protein_coding Homo_sapiens 0 335
ENST00000555437 CIPC-002 protein_coding Homo_sapiens 0 198
ENST00000555611 CIPC-004 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000557115 CIPC-006 protein_coding Homo_sapiens 0 396

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