C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Brca1 associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185987 Bap1-006 ENSMUSG00000021901 10090 + 14:31256539-31257641 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000185987
Transcript ID Brain Ovary Placenta
ENSMUST00000185987 37.547±0.00 20.570±0.00 17.991±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296288 BAP1-010 protein_coding Homo_sapiens 0 566
ENST00000460680 BAP1-001 protein_coding Homo_sapiens 0 566
ENST00000469613 BAP1-015 protein_coding Homo_sapiens 4e-29 134
ENST00000490804 BAP1-008 retained_intron Homo_sapiens 0 361

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