C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469613 BAP1-015 ENSG00000163930 9606 - 3:52401023-52404477 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverLungMuscleOvaryENST00000469613
Transcript ID Breast Colon Kidney Liver Lung Muscle Ovary
ENST00000469613 7.204±0.00 4.741±0.00 11.041±0.00 9.692±0.00 3.609±0.00 9.477±0.00 6.705±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0001 VISTA 3:52127966-52731115

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190788 Bap1-002 retained_intron Mus_musculus 0 521
ENSMUST00000022458 Bap1-001 protein_coding Mus_musculus 0 521
ENSMUST00000185700 Bap1-008 retained_intron Mus_musculus 0 350
ENSMUST00000185987 Bap1-006 retained_intron Mus_musculus 4e-29 134

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