C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | protein tyrosine phosphatase, receptor type, N | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000186178  |
Ptprn-005 |
ENSMUSG00000026204 |
10090 | - |
1:75258491-75263907  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000916 | CIL_000916_0002 | VISTA | 1:75047166-75647630 |
| CIL_0006NW | CIL_0006NW_0002 | CGP | 1:75236406-75264502 |
| CIL_0006NX | CIL_0006NX_0002 | CGP | 1:75247027-75278415 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000295718
|
PTPRN-001 | protein_coding | Homo_sapiens | 0 | 399 |
|
ENST00000409251
|
PTPRN-003 | protein_coding | Homo_sapiens | 0 | 399 |
|
ENST00000412847
|
PTPRN-012 | protein_coding | Homo_sapiens | 0 | 401 |
|
ENST00000423636
|
PTPRN-021 | protein_coding | Homo_sapiens | 0 | 405 |
|
ENST00000440552
|
PTPRN-011 | protein_coding | Homo_sapiens | 0 | 401 |
|
ENST00000442029
|
PTPRN-013 | protein_coding | Homo_sapiens | 0 | 405 |
|
ENST00000446182
|
PTPRN-008 | protein_coding | Homo_sapiens | 0 | 401 |
|
ENST00000451506
|
PTPRN-009 | protein_coding | Homo_sapiens | 0 | 405 |
|
ENST00000462351
|
PTPRN-006 | retained_intron | Homo_sapiens | 0 | 339 |
|
ENST00000468454
|
PTPRN-014 | processed_transcript | Homo_sapiens | 0 | 224 |
|
ENST00000476930
|
PTPRN-016 | retained_intron | Homo_sapiens | 2.8026e-45 | 185 |
|
ENST00000477819
|
PTPRN-015 | retained_intron | Homo_sapiens | 1e-20 | 104 |
|
ENST00000606213
|
PTPRN-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 388 |
