C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, N
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462351 PTPRN-006 ENSG00000054356 9606 - 2:219289625-219308197 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000462351
Transcript ID Ovary Testis
ENST00000462351 0.014±0.00 0.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_0006NW CIL_0006NW_0001 CGP 2:219279267-219309648
CIL_0006NX CIL_0006NX_0001 CGP 2:219289623-219333177

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027404 Ptprn-001 protein_coding Mus_musculus 0 2338
ENSMUST00000189769 Ptprn-004 protein_coding Mus_musculus 0 339
ENSMUST00000186178 Ptprn-005 protein_coding Mus_musculus 0 339
ENSMUST00000185849 Ptprn-003 protein_coding Mus_musculus 0 327

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