C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 6, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186192 RP23-215C21.2-001 ENSMUSG00000101589 10090 - 1:17397412-17400281 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000186192
Transcript ID Adipose Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000186192 0.034±0.00 0.022±0.00 0.015±0.00 0.087±0.00 0.033±0.03 0.006±0.00 0.029±0.00 0.011±0.00 0.073±0.05 0.009±0.00 0.316±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008K CIL_00008K_0003 CGP 1:17145362-17630939

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266022 RBM6-001 protein_coding Homo_sapiens 0 3118
ENST00000419610 RBM6-002 nonsense_mediated_decay Homo_sapiens 0 1823
ENST00000421682 RBM6-019 protein_coding Homo_sapiens 0 340
ENST00000422955 RBM6-007 protein_coding Homo_sapiens 0 1908
ENST00000425608 RBM6-005 nonsense_mediated_decay Homo_sapiens 0 1110
ENST00000434592 RBM6-008 nonsense_mediated_decay Homo_sapiens 0 1544
ENST00000438912 RBM6-017 protein_coding Homo_sapiens 0 527
ENST00000441115 RBM6-004 processed_transcript Homo_sapiens 0 1461
ENST00000442092 RBM6-006 protein_coding Homo_sapiens 0 1903
ENST00000443081 RBM6-009 protein_coding Homo_sapiens 0 3118
ENST00000446471 RBM6-014 protein_coding Homo_sapiens 0 396
ENST00000454079 RBM6-003 nonsense_mediated_decay Homo_sapiens 0 2145
ENST00000464013 RBM6-023 processed_transcript Homo_sapiens 0 267
ENST00000478026 RBM6-020 retained_intron Homo_sapiens 0 267
ENST00000483350 RBM6-016 retained_intron Homo_sapiens 0 573

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