C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186553 Ppfia4-006 ENSMUSG00000026458 10090 - 1:134298381-134311598 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000186553
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000186553 1.481±0.88 2.664±0.84 6.047±0.00 4.063±1.90 2.320±1.03 0.950±0.26 0.728±0.23 0.492±0.17 2.160±0.26 0.416±0.10 2.685±0.88 1.055±0.36 1.497±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272198 PPFIA4-002 protein_coding Homo_sapiens 0 1147
ENST00000295706 PPFIA4-201 protein_coding Homo_sapiens 0 1103
ENST00000367240 PPFIA4-001 protein_coding Homo_sapiens 0 1147
ENST00000447715 PPFIA4-005 protein_coding Homo_sapiens 0 1147
ENST00000486360 PPFIA4-003 retained_intron Homo_sapiens 0 896
ENST00000594656 PPFIA4-011 retained_intron Homo_sapiens 0 436
ENST00000597023 PPFIA4-010 retained_intron Homo_sapiens 0 350
ENST00000599966 PPFIA4-008 protein_coding Homo_sapiens 0 1103
ENST00000600426 PPFIA4-004 protein_coding Homo_sapiens 0 1085

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