C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000594656  |
PPFIA4-011 |
ENSG00000143847 |
9606 | + |
1:203061366-203067765  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000TW | CIL_0000TW_0002 | CGP | 1:203007386-203078740 |
| CIL_0000TV | CIL_0000TV_0002 | CGP | 1:203026498-203086036 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000186553
|
Ppfia4-006 | retained_intron | Mus_musculus | 0 | 436 |
|
ENSMUST00000189361
|
Ppfia4-003 | protein_coding | Mus_musculus | 0 | 401 |
|
ENSMUST00000168515
|
Ppfia4-001 | protein_coding | Mus_musculus | 0 | 401 |
|
ENSMUST00000186730
|
Ppfia4-007 | protein_coding | Mus_musculus | 0 | 357 |
|
ENSDART00000112567
|
ppfia4-001 | protein_coding | Danio_rerio | 0 | 285 |
|
ENSDART00000034834
|
ppfia2-201 | protein_coding | Danio_rerio | 0 | 279 |
|
ENSDART00000142140
|
ppfia2-001 | protein_coding | Danio_rerio | 0 | 279 |
|
ENSMUST00000189862
|
Ppfia4-005 | retained_intron | Mus_musculus | 3e-26 | 122 |
|
ENSMUST00000186964
|
Ppfia4-004 | processed_transcript | Mus_musculus | 3e-26 | 122 |
