C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: non-catalytic region of tyrosine kinase adaptor protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186591 Nck1-006 ENSMUSG00000032475 10090 - 9:100497577-100546122 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000186591
Transcript ID Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000186591 6.796±0.00 4.774±0.40 4.332±0.33 4.099±0.00 9.639±1.29 9.602±2.63 8.240±4.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00092I CIL_00092I_0002 VISTA 9:99894020-100495329
CIL_0009A5 CIL_0009A5_0002 VISTA 9:99910151-100511937
CIL_0009A4 CIL_0009A4_0002 VISTA 9:99971528-100572973
CIL_0001BW CIL_0001BW_0003 CGP 9:100492293-100571090

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000288986 NCK1-001 protein_coding Homo_sapiens 0 994
ENST00000460960 NCK1-007 retained_intron Homo_sapiens 0 355
ENST00000467911 NCK1-011 protein_coding Homo_sapiens 0 243
ENST00000469404 NCK1-002 protein_coding Homo_sapiens 0 569
ENST00000476286 NCK1-006 protein_coding Homo_sapiens 0 348
ENST00000478862 NCK1-008 retained_intron Homo_sapiens 0 387
ENST00000481752 NCK1-003 protein_coding Homo_sapiens 0 917
ENST00000482071 NCK1-012 retained_intron Homo_sapiens 0 361
ENST00000485096 NCK1-005 protein_coding Homo_sapiens 0 514
ENST00000488930 NCK1-009 protein_coding Homo_sapiens 0 604
ENST00000491539 NCK1-004 protein_coding Homo_sapiens 0 577
ENST00000496489 NCK1-010 protein_coding Homo_sapiens 0 512

Loading