C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186964 Ppfia4-004 ENSMUSG00000026458 10090 - 1:134296785-134304846 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyLiverMuscleOvaryENSMUST00000186964
Transcript ID Adrenal Colon Kidney Liver Muscle Ovary
ENSMUST00000186964 0.425±0.08 0.567±0.13 0.183±0.00 0.161±0.04 0.195±0.05 0.481±0.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272198 PPFIA4-002 protein_coding Homo_sapiens 0 660
ENST00000295706 PPFIA4-201 protein_coding Homo_sapiens 0 660
ENST00000367240 PPFIA4-001 protein_coding Homo_sapiens 0 660
ENST00000447715 PPFIA4-005 protein_coding Homo_sapiens 0 660
ENST00000486360 PPFIA4-003 retained_intron Homo_sapiens 0 658
ENST00000594656 PPFIA4-011 retained_intron Homo_sapiens 3e-26 122
ENST00000597023 PPFIA4-010 retained_intron Homo_sapiens 0 351
ENST00000599966 PPFIA4-008 protein_coding Homo_sapiens 0 660
ENST00000600426 PPFIA4-004 protein_coding Homo_sapiens 0 660

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