C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor AP-2 beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186972 Tfap2b-005 ENSMUSG00000025927 10090 + 1:19213879-19219253 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyOvaryTestisENSMUST00000186972
Transcript ID Adrenal Breast Kidney Ovary Testis
ENSMUST00000186972 1.149±0.19 3.334±0.59 4.033±0.21 0.107±0.00 0.406±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MC CIL_0007MC_0006 UCNEbase 1:18307438-19700223
CIL_000813 CIL_000813_0002 VISTA 1:18655282-19257504
CIL_00096L CIL_00096L_0002 VISTA 1:18806734-19407712
CIL_0005MY CIL_0005MY_0002 CGP 1:19103022-19238576
CIL_0005MX CIL_0005MX_0002 CGP 1:19208914-20618064

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344788 TFAP2B-002 protein_coding Homo_sapiens 0 702
ENST00000393655 TFAP2B-001 protein_coding Homo_sapiens 0 704
ENST00000489228 TFAP2B-003 processed_transcript Homo_sapiens 0 601

Loading