C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344788 TFAP2B-002 ENSG00000008196 9606 + 6:50818723-50828679 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeOvaryENST00000344788
Transcript ID Adipose Ovary
ENST00000344788 0.026±0.00 0.043±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MC CIL_0007MC_0001 UCNEbase 6:50093187-51124665
CIL_000813 CIL_000813_0001 VISTA 6:50284539-50886680
CIL_00096L CIL_00096L_0001 VISTA 6:50417531-51018524
CIL_0005MY CIL_0005MY_0001 CGP 6:50713828-50847613
CIL_00092G CIL_00092G_0001 VISTA 6:50808492-51409496
CIL_0005MX CIL_0005MX_0001 CGP 6:50818723-52087625

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000187754 Tfap2b-002 protein_coding Mus_musculus 0 987
ENSMUST00000027059 Tfap2b-001 protein_coding Mus_musculus 0 987
ENSMUST00000064976 Tfap2b-003 protein_coding Mus_musculus 0 754
ENSMUST00000186972 Tfap2b-005 retained_intron Mus_musculus 0 702
ENSMUST00000191068 Tfap2b-004 retained_intron Mus_musculus 0 652

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