C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Snf2-related CREBBP activator protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187040 Srcap-001 ENSMUSG00000053877 10090 + 7:127513018-127561219 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000187040
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000187040 3.135±1.40 7.293±2.70 2.692±0.00 6.384±3.96 2.709±0.00 3.491±0.46 3.073±0.93 3.332±1.00 1.590±0.38 3.249±1.44 3.343±0.98 8.543±1.17 3.673±2.88 2.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VJ CIL_0003VJ_0003 CGP 7:127485221-127567054
CIL_0001KJ CIL_0001KJ_0002 CGP 7:127511983-127583305

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process
GO:0043234 IEA protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262518 SRCAP-001 protein_coding Homo_sapiens 0 6728
ENST00000380361 SRCAP-002 nonsense_mediated_decay Homo_sapiens 0 3932
ENST00000395059 SRCAP-201 protein_coding Homo_sapiens 0 3932
ENST00000411466 SRCAP-004 protein_coding Homo_sapiens 0 806
ENST00000483083 SRCAP-003 protein_coding Homo_sapiens 0 3862

Loading