C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyloid beta (A4) precursor protein-binding, family B, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187057 Apbb1-007 ENSMUSG00000037032 10090 - 7:105558818-105568777 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyTestisENSMUST00000187057
Transcript ID Adrenal Breast Colon Kidney Testis
ENSMUST00000187057 3.521±0.35 1.493±0.00 2.425±0.17 1.553±0.00 4.585±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AE CIL_0004AE_0002 CGP 7:105554360-105581653
CIL_0004N8 CIL_0004N8_0002 CGP 7:105558483-105600116

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299402 APBB1-002 protein_coding Homo_sapiens 0 2019
ENST00000311051 APBB1-001 protein_coding Homo_sapiens 0 2019
ENST00000389906 APBB1-201 protein_coding Homo_sapiens 0 1991
ENST00000524626 APBB1-010 retained_intron Homo_sapiens 0 1476
ENST00000526240 APBB1-020 processed_transcript Homo_sapiens 0 680
ENST00000526925 APBB1-017 retained_intron Homo_sapiens 0 1227
ENST00000529519 APBB1-006 protein_coding Homo_sapiens 0 1266
ENST00000529778 APBB1-009 retained_intron Homo_sapiens 0 324
ENST00000529890 APBB1-004 protein_coding Homo_sapiens 0 1190
ENST00000530885 APBB1-007 protein_coding Homo_sapiens 0 2226
ENST00000532020 APBB1-026 protein_coding Homo_sapiens 0 479
ENST00000533139 APBB1-003 retained_intron Homo_sapiens 0 1221
ENST00000533407 APBB1-016 retained_intron Homo_sapiens 0 1079
ENST00000534188 APBB1-008 retained_intron Homo_sapiens 0 798
ENST00000608394 APBB1-005 protein_coding Homo_sapiens 0 2030
ENST00000608435 APBB1-011 non_stop_decay Homo_sapiens 0 1711
ENST00000608645 APBB1-025 protein_coding Homo_sapiens 0 1989
ENST00000608655 APBB1-024 protein_coding Homo_sapiens 0 2115
ENST00000608704 APBB1-014 protein_coding Homo_sapiens 0 1991
ENST00000609331 APBB1-018 protein_coding Homo_sapiens 0 1989
ENST00000609360 APBB1-023 protein_coding Homo_sapiens 0 1991
ENST00000610474 APBB1-202 protein_coding Homo_sapiens 0 2030
ENST00000618005 APBB1-203 protein_coding Homo_sapiens 0 1989
ENST00000621678 APBB1-204 protein_coding Homo_sapiens 0 1989

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