C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Brca1 associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187156 Bap1-007 ENSMUSG00000021901 10090 + 14:31256269-31258524 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000187156
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000187156 56.659±0.00 33.902±0.00 22.031±1.38 68.415±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296288 BAP1-010 protein_coding Homo_sapiens 0 555
ENST00000460680 BAP1-001 protein_coding Homo_sapiens 0 555
ENST00000466093 BAP1-013 retained_intron Homo_sapiens 0 335
ENST00000478368 BAP1-014 protein_coding Homo_sapiens 0 348

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