C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 3-ketodihydrosphingosine reductase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187319 Kdsr-002 ENSMUSG00000009905 10090 - 1:106747500-106759699 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000187319
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000187319 16.245±0.00 47.232±14.36 6.294±0.00 15.984±4.55 12.468±2.16 5.841±0.69 5.920±0.99 10.624±1.30 17.204±4.49 32.476±12.35 1.471±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000B4 CIL_0000B4_0003 CGP 1:106538178-106759727
CIL_0000B7 CIL_0000B7_0003 CGP 1:106720459-106796728

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000155671 kdsr-003 protein_coding Danio_rerio 0.00000000003 73
ENSDART00000022621 kdsr-001 protein_coding Danio_rerio 0.00000000003 73
ENST00000326575 KDSR-010 protein_coding Homo_sapiens 0 422
ENST00000406396 KDSR-001 protein_coding Homo_sapiens 0 422
ENST00000585456 KDSR-006 retained_intron Homo_sapiens 0 339
ENST00000589530 KDSR-008 retained_intron Homo_sapiens 0 433
ENST00000592327 KDSR-013 protein_coding Homo_sapiens 0 422

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