C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000B4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000089109-ENSDARG00000012021 CGP 7955 2:12977291-13046810
GeneTranscriptPositionBiotype
ENSDARG00000012021 (kdsr)
3-ketodihydrosphingosine reductase
ENSDART00000022621 (kdsr-001) 13015744-13046810 protein_coding
ENSDART00000155671 (kdsr-003) 13017009-13046583 protein_coding
ENSDART00000156573 (kdsr-002) 13044141-13046786 processed_transcript
ENSDARG00000089109 (BCL2 (2 of 2))
B-cell CLL/lymphoma 2
ENSDART00000149947 (BCL2 (2 of 2)-001) 12977291-13008258 protein_coding
CIL_0000B4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171791-ENSG00000119537 CGP 9606 18:63123346-63367510
GeneTranscriptPositionBiotype
ENSG00000171791 (BCL2)
B-cell CLL/lymphoma 2
ENST00000333681 (BCL2-002) 63127035-63319786 protein_coding
ENST00000398117 (BCL2-001) 63123346-63320128 protein_coding
ENST00000589955 (BCL2-003) 63317902-63318812 protein_coding
ENST00000590515 (BCL2-004) 63128212-63161869 processed_transcript
ENSG00000267390 (RP11-635N19.1)
ENST00000589905 (RP11-635N19.1-001) 63367328-63381629 antisense
ENSG00000267701 (RP11-28F1.2)
ENST00000588307 (RP11-28F1.2-001) 63313802-63314376 sense_intronic
ENSG00000267766 (RP11-299P2.1)
ENST00000587475 (RP11-299P2.1-001) 63151114-63151320 sense_intronic
CIL_0000B4_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057329-ENSMUSG00000009905 CGP 10090 1:106538178-106759727
GeneTranscriptPositionBiotype
ENSMUSG00000009905 (Kdsr)
3-ketodihydrosphingosine reductase
ENSMUST00000010049 (Kdsr-001) 106720459-106759727 protein_coding
ENSMUST00000187319 (Kdsr-002) 106747500-106759699 retained_intron
ENSMUST00000187617 (Kdsr-003) 106757102-106759683 retained_intron
ENSMUSG00000054006 (D630008O14Rik)
RIKEN cDNA D630008O14 gene
ENSMUST00000144260 (D630008O14Rik-002) 106541943-106558992 antisense
ENSMUST00000149909 (D630008O14Rik-001) 106541943-106575045 antisense
ENSMUSG00000057329 (Bcl2)
B cell leukemia/lymphoma 2
ENSMUST00000112751 (Bcl2-001) 106538178-106714274 protein_coding
ENSMUST00000189999 (Bcl2-002) 106710339-106713179 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000B4_0001ENSDARG00000012021ENSDART00000022621ENSDART00000155671ENSDART00000156573ENSDARG00000089109ENSDART00000149947CIL_0000B4_0002ENSG00000171791ENST00000333681ENST00000398117ENST00000589955ENST00000590515ENSG00000267390ENST00000589905ENSG00000267701ENST00000588307ENSG00000267766ENST00000587475CIL_0000B4_0003ENSMUSG00000009905ENSMUST00000010049ENSMUST00000187319ENSMUST00000187617ENSMUSG00000054006ENSMUST00000144260ENSMUST00000149909ENSMUSG00000057329ENSMUST00000112751ENSMUST00000189999
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000B4_0001ENSDARG00000012021ENSDART00000022621ENSDART00000155671ENSDARG00000089109ENSDART00000149947CIL_0000B4_0002ENSG00000171791ENST00000333681ENST00000398117ENSG00000267390ENST00000589905ENSG00000267701ENST00000588307ENSG00000267766ENST00000587475CIL_0000B4_0003ENSMUSG00000009905ENSMUST00000010049ENSMUST00000187319ENSMUSG00000054006ENSMUST00000144260ENSMUST00000149909ENSMUSG00000057329ENSMUST00000112751ENSMUST00000189999
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012021 ENSDART00000022621 N/A N/A N/A 11.996±0.53 N/A N/A 3.578±1.71 5.685±0.00 2.251±0.00 N/A 1.584±0.00 N/A N/A N/A
ENSDART00000155671 N/A N/A N/A N/A N/A N/A 2.451±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000089109 ENSDART00000149947 N/A N/A N/A 10.252±2.80 N/A N/A 0.280±0.10 0.257±0.08 0.036±0.00 N/A 1.095±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171791 ENST00000333681 N/A N/A 2.974±0.00 0.683±0.00 N/A 2.113±0.00 0.294±0.00 N/A 1.274±0.00 1.276±0.00 1.462±0.32 0.902±0.00 1.114±0.00 N/A
ENST00000398117 2.436±0.00 1.361±0.00 1.522±0.00 1.352±0.30 2.929±0.19 1.369±0.80 0.459±0.09 0.127±0.00 0.757±0.70 1.283±0.07 0.517±0.00 0.916±0.48 0.629±0.19 1.081±0.00
ENST00000589955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267390 ENST00000589905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.861±0.00 N/A N/A N/A
ENSG00000267701 ENST00000588307 0.336±0.00 0.586±0.00 0.703±0.00 0.467±0.45 1.450±0.81 0.410±0.00 0.016±0.00 0.659±0.00 0.164±0.14 0.820±0.73 N/A 0.363±0.34 0.193±0.09 0.324±0.00
ENSG00000267766 ENST00000587475 0.087±0.00 N/A N/A 0.098±0.00 N/A N/A N/A N/A 0.909±0.00 N/A N/A 2.990±0.00 0.235±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009905 ENSMUST00000010049 8.669±1.16 9.934±1.56 7.546±0.45 2.440±0.68 5.941±0.82 4.727±0.50 1.286±0.32 4.707±0.45 3.031±1.50 6.844±0.39 0.601±0.13 4.189±1.42 6.211±2.84 0.782±0.44
ENSMUST00000187319 16.245±0.00 47.232±14.36 N/A 6.294±0.00 15.984±4.55 12.468±2.16 N/A 5.841±0.69 5.920±0.99 10.624±1.30 N/A 17.204±4.49 32.476±12.35 1.471±0.34
ENSMUST00000187617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000054006 ENSMUST00000144260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00
ENSMUST00000149909 0.934±0.00 N/A N/A 1.915±0.00 N/A 1.436±0.00 N/A 0.916±0.07 0.124±0.00 N/A N/A 1.806±0.73 0.561±0.14 N/A
ENSMUSG00000057329 ENSMUST00000112751 1.880±1.00 0.571±0.19 1.921±0.35 1.607±0.59 1.685±0.78 1.259±0.16 0.534±0.06 0.927±0.17 0.196±0.09 1.497±0.17 0.309±0.20 1.170±0.41 0.304±0.11 0.069±0.02
ENSMUST00000189999 1.238±0.62 1.085±0.15 N/A N/A 3.249±2.17 2.156±0.38 0.300±0.08 0.679±0.06 0.132±0.07 1.878±0.18 N/A 2.477±0.55 0.113±0.00 N/A

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