C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor receptor superfamily, member 11a, NFKB activator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187812 Tnfrsf11a-002 ENSMUSG00000026321 10090 + 1:105780750-105814403 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000187812
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000187812 1.671±0.00 1.623±0.15 3.250±0.00 30.512±8.36 0.508±0.00 0.738±0.00 0.151±0.00 1.156±0.00 0.230±0.00 0.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071U CIL_00071U_0002 CGP 1:105663861-105847981
CIL_00076G CIL_00076G_0002 CGP 1:105780718-106034074

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269485 TNFRSF11A-002 protein_coding Homo_sapiens 0 433
ENST00000586569 TNFRSF11A-001 protein_coding Homo_sapiens 0 433
ENST00000616710 TNFRSF11A-201 protein_coding Homo_sapiens 0 433
ENST00000617039 TNFRSF11A-202 protein_coding Homo_sapiens 0 433

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