C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translocating chain-associating membrane protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188377 Tram1-003 ENSMUSG00000025935 10090 - 1:13578118-13589875 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLungOvaryENSMUST00000188377
Transcript ID Adrenal Breast Colon Lung Ovary
ENSMUST00000188377 31.372±15.18 16.973±3.57 14.073±5.40 17.305±0.00 26.169±8.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BN CIL_0003BN_0002 CGP 1:13139105-13589910
CIL_0001DD CIL_0001DD_0002 CGP 1:13564698-13660546

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262213 TRAM1-001 protein_coding Homo_sapiens 0 375
ENST00000518678 TRAM1-004 protein_coding Homo_sapiens 3e-35 152
ENST00000520700 TRAM1-005 processed_transcript Homo_sapiens 9e-31 137
ENST00000521049 TRAM1-003 processed_transcript Homo_sapiens 0 505

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