C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000188619  |
Cops5-005 |
ENSMUSG00000025917 |
10090 | - |
1:10030687-10038149  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003BC | CIL_0003BC_0002 | CGP | 1:9968624-10038168 |
| CIL_0003BF | CIL_0003BF_0002 | CGP | 1:10024601-10136768 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000357849
|
COPS5-001 | protein_coding | Homo_sapiens | 0 | 767 |
|
ENST00000415778
|
COPS5P1-001 | processed_pseudogene | Homo_sapiens | 0 | 599 |
|
ENST00000517736
|
COPS5-010 | protein_coding | Homo_sapiens | 0 | 765 |
|
ENST00000517834
|
PPP1R42-013 | processed_transcript | Homo_sapiens | 1.4013e-45 | 187 |
|
ENST00000518374
|
COPS5-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 765 |
|
ENST00000518747
|
COPS5-006 | protein_coding | Homo_sapiens | 0 | 704 |
|
ENST00000521386
|
COPS5-003 | retained_intron | Homo_sapiens | 0 | 765 |
|
ENST00000521509
|
COPS5-002 | retained_intron | Homo_sapiens | 0 | 765 |
|
ENST00000523086
|
COPS5-009 | processed_transcript | Homo_sapiens | 3e-22 | 110 |
|
ENST00000523890
|
COPS5-012 | nonsense_mediated_decay | Homo_sapiens | 0 | 765 |
