C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: COP9 signalosome subunit 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523890 COPS5-012 ENSG00000121022 9606 - 8:67045810-67062029 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENST00000523890
Transcript ID Brain Heart
ENST00000523890 21.481±0.00 20.642±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BD CIL_0003BD_0001 CGP 8:66946501-67056604
CIL_0003BC CIL_0003BC_0001 CGP 8:66964099-67083783
CIL_0003BF CIL_0003BF_0001 CGP 8:67043079-67196263

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027050 Cops5-001 protein_coding Mus_musculus 0 1075
ENSMUST00000186528 Cops5-006 nonsense_mediated_decay Mus_musculus 0 957
ENSMUST00000188619 Cops5-005 protein_coding Mus_musculus 0 765
ENSMUST00000139578 Cops5-003 retained_intron Mus_musculus 0 721
ENSMUST00000150509 Cops5-002 retained_intron Mus_musculus 0 580
ENSMUST00000190155 Cops5-007 nonsense_mediated_decay Mus_musculus 0 525

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