C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cholinergic receptor, nicotinic, gamma polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189392 Chrng-004 ENSMUSG00000026253 10090 + 1:87206074-87208595 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMusclePlacentaTestisENSMUST00000189392
Transcript ID Colon Muscle Placenta Testis
ENSMUST00000189392 0.060±0.00 0.037±0.00 0.035±0.00 0.050±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HU CIL_0003HU_0002 CGP 1:87190607-87212694

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293780 CHRNE-001 protein_coding Homo_sapiens 0.00000002 66
ENST00000381365 C17orf107-001 protein_coding Homo_sapiens 0.00000003 66
ENST00000389494 CHRNG-001 protein_coding Homo_sapiens 0 568
ENST00000485094 CHRNG-003 retained_intron Homo_sapiens 0 573

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