C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H3i
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189457 Hist1h3i-001 ENSMUSG00000101972 10090 - 13:21782960-21783370 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000189457
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000189457 1.651±1.43 1.281±0.36 0.422±0.04 13.643±3.40 1.562±0.38 4.878±1.53 0.217±0.05 0.276±0.16 12.589±17.02 1.128±0.24 1.014±0.00 5.545±1.98 7.998±5.46 0.779±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096D CIL_00096D_0002 VISTA 13:21673105-22276611

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000115062 si:ch211-113a14.14-201 protein_coding Danio_rerio 0 449
ENSDART00000123081 si:ch211-113a14.14-204 protein_coding Danio_rerio 0 442
ENSDART00000152546 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 438
ENSDART00000108895 si:dkey-261m9.16-001 protein_coding Danio_rerio 0 438
ENSDART00000133379 hist2h3c-001 protein_coding Danio_rerio 0 436
ENSDART00000156376 hist2h3c-001 protein_coding Danio_rerio 0 433
ENSDART00000129254 si:ch211-113a14.14-203 protein_coding Danio_rerio 0 433
ENSDART00000154856 hist2h3c-001 protein_coding Danio_rerio 0 427
ENSDART00000126541 si:ch211-113a14.14-202 protein_coding Danio_rerio 0 427
ENSDART00000103016 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 416
ENSDART00000103007 zgc:173552-001 protein_coding Danio_rerio 0 416
ENSDART00000089844 protein_coding Danio_rerio 0 414
ENSDART00000136456 protein_coding Danio_rerio 0 411
ENSDART00000073405 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 411
ENSDART00000151600 protein_coding Danio_rerio 0 348
ENSDART00000093030 protein_coding Danio_rerio 0 339
ENST00000356476 HIST1H3D-001 protein_coding Homo_sapiens 0 510
ENST00000366696 HIST3H3-001 protein_coding Homo_sapiens 0 481
ENST00000369163 HIST1H3H-001 protein_coding Homo_sapiens 0 492
ENST00000614911 HIST1H3E-001 protein_coding Homo_sapiens 0 473
ENST00000618052 HIST1H3F-001 protein_coding Homo_sapiens 0 460

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