C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CLIP associating protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189570 Clasp1-004 ENSMUSG00000064302 10090 + 1:118389456-118607739 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaENSMUST00000189570
Transcript ID Muscle Ovary Placenta
ENSMUST00000189570 1.258±0.00 4.348±0.00 1.759±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VI CIL_0001VI_0002 CGP 1:118321839-118612678
CIL_0001QO CIL_0001QO_0002 CGP 1:118389058-118685168

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263710 CLASP1-201 protein_coding Homo_sapiens 0 2900
ENST00000397587 CLASP1-202 protein_coding Homo_sapiens 0 5681
ENST00000409078 CLASP1-001 protein_coding Homo_sapiens 0 2900
ENST00000418989 CLASP1-012 protein_coding Homo_sapiens 0 617
ENST00000430234 CLASP1-014 processed_transcript Homo_sapiens 0 675
ENST00000452274 CLASP1-016 nonsense_mediated_decay Homo_sapiens 0 2265
ENST00000455322 CLASP1-203 protein_coding Homo_sapiens 0 5694
ENST00000463621 CLASP1-003 retained_intron Homo_sapiens 0 508
ENST00000472776 CLASP1-004 retained_intron Homo_sapiens 0 1024
ENST00000474065 CLASP1-010 retained_intron Homo_sapiens 0 562
ENST00000485112 CLASP1-009 retained_intron Homo_sapiens 0 612
ENST00000491646 CLASP1-015 retained_intron Homo_sapiens 0 342
ENST00000541377 CLASP1-204 protein_coding Homo_sapiens 0 5969

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