C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Snf2-related CREBBP activator protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189629 Srcap-009 ENSMUSG00000053877 10090 + 7:127519584-127567054 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverOvaryPlacentaENSMUST00000189629
Transcript ID Bladder Brain Breast Liver Ovary Placenta
ENSMUST00000189629 1.152±0.01 1.686±0.00 1.287±0.00 1.012±0.26 5.418±0.12 0.712±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VJ CIL_0003VJ_0003 CGP 7:127485221-127567054
CIL_0001KJ CIL_0001KJ_0002 CGP 7:127511983-127583305

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262518 SRCAP-001 protein_coding Homo_sapiens 0 3932
ENST00000380361 SRCAP-002 nonsense_mediated_decay Homo_sapiens 0 6117
ENST00000395059 SRCAP-201 protein_coding Homo_sapiens 0 4172
ENST00000411466 SRCAP-004 protein_coding Homo_sapiens 0 322
ENST00000483083 SRCAP-003 protein_coding Homo_sapiens 0 1945

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