C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: runt related transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189679 Runx1-006 ENSMUSG00000022952 10090 - 16:92815428-92826074 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverTestisENSMUST00000189679
Transcript ID Liver Testis
ENSMUST00000189679 0.057±0.00 0.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ON CIL_0008ON_0002 VISTA 16:92040534-92642015
CIL_0007SX CIL_0007SX_0002 VISTA 16:92042784-92648394
CIL_0008OM CIL_0008OM_0002 VISTA 16:92044467-92645647
CIL_0008ZS CIL_0008ZS_0002 VISTA 16:92110151-92716672
CIL_00094R CIL_00094R_0002 VISTA 16:92127453-92730131
CIL_00078F CIL_00078F_0002 CGP 16:92485736-92826149

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300305 RUNX1-002 protein_coding Homo_sapiens 0 224
ENST00000416754 RUNX1-004 protein_coding Homo_sapiens 1e-37 159
ENST00000437180 RUNX1-201 protein_coding Homo_sapiens 0 335
ENST00000455571 RUNX1-010 protein_coding Homo_sapiens 0 335
ENST00000482318 RUNX1-003 nonsense_mediated_decay Homo_sapiens 0 322

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