C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | runt-related transcription factor 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000455571  |
RUNX1-010 |
ENSG00000159216 |
9606 | - |
21:34880606-35049298  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008ZS | CIL_0008ZS_0001 | VISTA | 21:34243666-34847364 |
| CIL_00094R | CIL_00094R_0001 | VISTA | 21:34258399-34859715 |
| CIL_00078F | CIL_00078F_0001 | CGP | 21:34669389-36004667 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005524 | IEA | ATP binding |
| GO:0005634 | IEA | nucleus |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000023673
|
Runx1-001 | protein_coding | Mus_musculus | 0 | 859 |
|
ENSMUST00000168195
|
Runx1-004 | protein_coding | Mus_musculus | 0 | 529 |
|
ENSMUST00000113956
|
Runx1-003 | protein_coding | Mus_musculus | 0 | 529 |
|
ENSMUST00000189126
|
Runx1-005 | retained_intron | Mus_musculus | 0 | 527 |
|
ENSMUST00000186296
|
Runx1-002 | protein_coding | Mus_musculus | 0 | 374 |
|
ENSMUST00000189679
|
Runx1-006 | protein_coding | Mus_musculus | 0 | 335 |
|
ENSDART00000130697
|
RUNX1 (2 of 2)-201 | protein_coding | Danio_rerio | 0 | 324 |
|
ENSMUST00000119564
|
Runx3-002 | protein_coding | Mus_musculus | 0 | 267 |
|
ENSMUST00000056977
|
Runx3-001 | protein_coding | Mus_musculus | 0 | 267 |
|
ENSMUST00000156478
|
Runx3-003 | retained_intron | Mus_musculus | 0 | 265 |
