C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 50 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438163 DDX50P1-001 ENSG00000229816 9606 + 2:32201600-32203999 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000438163
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000438163 0.153±0.00 0.318±0.00 0.928±0.00 0.169±0.03 0.322±0.28 0.459±0.41 0.041±0.00 0.078±0.05 0.271±0.21 0.607±0.52 0.162±0.09 0.046±0.03 0.163±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VK CIL_0000VK_0001 CGP 2:32063611-32224379
CIL_0000MX CIL_0000MX_0001 CGP 2:32165841-32265854

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020270 Ddx50-201 protein_coding Mus_musculus 0 1733
ENSMUST00000189949 RP23-230A14.1-001 processed_pseudogene Mus_musculus 0 1690

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