C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: glypican 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190215 Gpc1-005 ENSMUSG00000034220 10090 + 1:92856768-92857595 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TM CIL_0007TM_0002 VISTA 1:92418794-93021273
CIL_0009AE CIL_0009AE_0002 VISTA 1:92485614-93089442
CIL_0003NP CIL_0003NP_0002 CGP 1:92644218-92860779
CIL_0004UD CIL_0004UD_0003 CGP 1:92831645-92902906

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264039 GPC1-001 protein_coding Homo_sapiens 0 259
ENST00000420138 GPC1-002 protein_coding Homo_sapiens 0 259
ENST00000425056 GPC1-009 protein_coding Homo_sapiens 0 248
ENST00000455111 GPC1-010 protein_coding Homo_sapiens 4.00001e-41 172
ENST00000469694 GPC1-004 retained_intron Homo_sapiens 0 268
ENST00000495100 GPC1-003 retained_intron Homo_sapiens 0 268

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