| Transcript ID | Bladder | Breast | Colon | Lung |
|---|---|---|---|---|
| ENST00000425056 | 2.017±0.00 | 1.994±0.00 | 1.038±0.00 | 1.064±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | glypican 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000425056  |
GPC1-009 |
ENSG00000063660 |
9606 | + |
2:240457965-240464939  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007TM | CIL_0007TM_0001 | VISTA | 2:239957940-240560738 |
| CIL_0009AE | CIL_0009AE_0001 | VISTA | 2:240068562-240673577 |
| CIL_0003NP | CIL_0003NP_0001 | CGP | 2:240139026-240468078 |
| CIL_0004UD | CIL_0004UD_0002 | CGP | 2:240435671-240569209 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005578 | IEA | proteinaceous extracellular matrix |
| GO:0016020 | IEA | membrane |
| GO:0043395 | IEA | heparan sulfate proteoglycan binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000045970
|
Gpc1-001 | protein_coding | Mus_musculus | 0 | 1051 |
|
ENSMUST00000190586
|
Gpc1-003 | retained_intron | Mus_musculus | 0 | 645 |
|
ENSMUST00000190215
|
Gpc1-005 | retained_intron | Mus_musculus | 0 | 248 |
|
ENSMUST00000190677
|
Gpc1-004 | retained_intron | Mus_musculus | 0 | 248 |
