C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Snf2-related CREBBP activator protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190390 Srcap-013 ENSMUSG00000053877 10090 + 7:127516148-127560769 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000190390
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000190390 6.376±2.08 8.913±2.61 2.808±0.36 7.053±3.27 10.057±4.40 6.159±1.47 3.546±0.40 6.205±1.22 2.919±0.99 9.235±1.46 2.699±0.97 12.199±4.27 5.767±3.00 8.169±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VJ CIL_0003VJ_0003 CGP 7:127485221-127567054
CIL_0001KJ CIL_0001KJ_0002 CGP 7:127511983-127583305

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262518 SRCAP-001 protein_coding Homo_sapiens 0 3932
ENST00000380361 SRCAP-002 nonsense_mediated_decay Homo_sapiens 0 4172
ENST00000395059 SRCAP-201 protein_coding Homo_sapiens 0 6433
ENST00000411466 SRCAP-004 protein_coding Homo_sapiens 0 411
ENST00000483083 SRCAP-003 protein_coding Homo_sapiens 0 2499

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