C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily C, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190497 Trpc1-003 ENSMUSG00000032839 10090 - 9:95706627-95750358 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungOvaryTestisENSMUST00000190497
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000190497 0.465±0.10 2.194±0.00 0.298±0.02 0.634±0.00 1.977±0.00 0.055±0.00 0.601±0.00 1.059±0.00 0.285±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273482 TRPC1-001 protein_coding Homo_sapiens 0 2612
ENST00000460401 TRPC1-004 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000476941 TRPC1-002 protein_coding Homo_sapiens 0 2780
ENST00000480101 TRPC1-005 retained_intron Homo_sapiens 0 580
ENST00000612385 TRPC1-201 protein_coding Homo_sapiens 0 2612

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