C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | glypican 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000190677  |
Gpc1-004 |
ENSMUSG00000034220 |
10090 | + |
1:92856562-92857522  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007TM | CIL_0007TM_0002 | VISTA | 1:92418794-93021273 |
| CIL_0009AE | CIL_0009AE_0002 | VISTA | 1:92485614-93089442 |
| CIL_0003NP | CIL_0003NP_0002 | CGP | 1:92644218-92860779 |
| CIL_0004UD | CIL_0004UD_0003 | CGP | 1:92831645-92902906 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000264039
|
GPC1-001 | protein_coding | Homo_sapiens | 0 | 322 |
|
ENST00000420138
|
GPC1-002 | protein_coding | Homo_sapiens | 0 | 322 |
|
ENST00000425056
|
GPC1-009 | protein_coding | Homo_sapiens | 0 | 248 |
|
ENST00000455111
|
GPC1-010 | protein_coding | Homo_sapiens | 0 | 235 |
|
ENST00000469694
|
GPC1-004 | retained_intron | Homo_sapiens | 0 | 331 |
|
ENST00000495100
|
GPC1-003 | retained_intron | Homo_sapiens | 0 | 331 |
