C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 29667
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190817 RP24-369P14.1-001 ENSMUSG00000100794 10090 + 1:100282791-100283280 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000190817
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000190817 0.224±0.11 0.139±0.00 1.812±0.02 1.353±0.18 0.632±0.66 0.235±0.11 0.296±0.17 0.127±0.04 0.484±0.62 0.113±0.01 1.022±0.38 0.422±0.19 0.130±0.02 0.677±0.32

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 499
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 261
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 479
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 499
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 499
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 331
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 278
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 346
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 339
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 466
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 344
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 331
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 340
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 355
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 279
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 248
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 261
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 261
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 261
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 481
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 364
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 446
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 274
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 235
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 351
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 387
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 363
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 241

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