C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA polymerase II associated protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000005386 RPAP3-001 ENSG00000005175 9606 - 12:47661249-47706061 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000005386
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000005386 0.502±0.00 0.610±0.00 0.070±0.00 0.615±0.00 0.929±0.00 0.269±0.00 1.024±0.50 0.593±0.00 1.045±0.00 1.217±0.45 1.109±0.23 1.687±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YR CIL_0005YR_0001 CGP 12:47079603-47706061
CIL_0005YS CIL_0005YS_0001 CGP 12:47661249-47725567

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023104 Rpap3-201 protein_coding Mus_musculus 0 1461
ENSMUST00000122295 Gm5697-001 processed_pseudogene Mus_musculus 0 1074

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